Thank you Todd! He has solved the problem! The short term solution is to add: IPLOTSRV_NO_PDF_MEASURE = true to the iplotsrv.cfg file. The long term solution may be up for debate... We don't use the Model space/Sheet space in Microstation. So, I really don't have a handle on where Microstation is in regard to Model/Sheet space and whether they want to utilize multiple correctly scaled viewports in the produced pdfs.
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